V1_0.java [src/java/m/wqm/pestlosspot] Revision: d4e5c230d855e631706b46dd08625538a324d934 Date: Thu Aug 13 16:01:47 MDT 2015
package m.wqm.pestlosspot;
import csip.ModelDataService;
import java.util.ArrayList;
import javax.ws.rs.Path;
import oms3.annotations.Description;
import oms3.annotations.Name;
import org.codehaus.jettison.json.JSONArray;
import org.codehaus.jettison.json.JSONObject;
import csip.utils.JSONUtils;
import java.sql.Connection;
import java.sql.DriverManager;
import java.sql.ResultSet;
import java.sql.SQLException;
import java.sql.Statement;
import java.util.Map;
/**
*
* @ Srinivas
* @ Update Rumpal Sidhu
*/
@Name("WQM-4")
@Description("Pesticide Attributes (WQMPestAttr)")
@Path("m/pestlosspot/1.0")
public class V1_0 extends ModelDataService {
//SQL params names here for quick modification
private final String USER = "postgres";
private final String PASS = "admin";
private final String HOST = "localhost";
private final String PORT = "5432";
private final String DBNAME = "wqm";
private final String JDBC_TYPE = "jdbc:postgresql://";
private final String CONNECTION = JDBC_TYPE + HOST + ":" + PORT + "/" + DBNAME;
private final String CLASS_NAME = "org.postgresql.Driver";
//JSONArray getArray
private ArrayList<Input> components; // store the set of all input soilcomponents as objects
private ArrayList<Result1> result1; // store the result as objects
@Override
// reading the inputs from the json file into input object and placing it in the arraylist
protected void preProcess() throws Exception {
components = new ArrayList<>();
JSONArray groups = getJSONArrayParam("pestcomponents");
for (int i = 0; i < groups.length(); i++) {
Map<String, JSONObject> group = JSONUtils.preprocess(groups.getJSONArray(i));
int AoAId = JSONUtils.getIntParam(group, "AoAId", 0);
int operation_id = JSONUtils.getIntParam(group, "operation_id", 0);
String op_pest_id = JSONUtils.getStringParam(group, "op_pest_id", "err");
String app_rate = JSONUtils.getStringParam(group, "app_rate", "err");
String app_area = JSONUtils.getStringParam(group, "app_area", "err");
String app_method = JSONUtils.getStringParam(group, "app_method", "err");
Input input = new Input(AoAId, operation_id, op_pest_id, app_rate, app_area, app_method);
components.add(input);
}
}
@Override
protected String process() throws Exception {
result1 = new ArrayList<>();
Connection conn = null;
Statement statement = null;
try {
Class.forName(CLASS_NAME);
conn = DriverManager.getConnection(CONNECTION, USER, PASS);
conn.setAutoCommit(false);
statement = conn.createStatement();
for (Input ip : components) {
String ai_name = "";
double ai_ph = 0.0;
double ai_sol = 0.0;
double ai_koc = 0.0;
double ai_hl = 0.0;
double ai_fishtox = 0.0;
String ai_fishtoxtype = "";
double ai_humtox = 0.0;
String ai_humtoxtype = "";
String query = "SELECT * FROM wqm_pesticides WHERE \"PC_CODE\"='" + ip.op_pest_id + "';";
ResultSet results = statement.executeQuery(query);
while (results.next()) {
ai_name = results.getString("AI_NAME");
ai_ph = results.getDouble("PH");
ai_hl = results.getDouble("SOIL_HL_RV");
ai_koc = results.getDouble("KOC_RV");
ai_sol = results.getDouble("SOL_RV");
ai_humtox = results.getDouble("HUMAN_TOX_PPB");
ai_humtoxtype = results.getString("HUMAN_TOX_TYPE");
ai_fishtox = results.getDouble("FISH_TOX_PPB");
ai_fishtoxtype = results.getString("FISH_TOX_TYPE");
}
// #Compute pesticide leaching potential fore each operation pesticide
double log_val = Math.log10(ai_hl) * (4 - Math.log10(ai_koc));
String ai_plp;
if (log_val >= 2.8) {
if (ip.app_area.equals("Banded")
|| ip.app_method.equals("Foliar Application")
|| ip.app_rate.equals("LOW")) {
ai_plp = "INTERMEDIATE";
} else if (ip.app_area.equals("Spot Treatment")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_plp = "LOW";
} else {
ai_plp = "HIGH";
}
} else if (log_val < 0.0 || (ai_sol < 1 && ai_hl <= 1)) {
ai_plp = "VERY LOW";
} else if (log_val <= 1.8) {
if (ip.app_area.equals("Banded")
|| ip.app_area.equals("Spot Treatment")
|| ip.app_method.equals("Foliar Application")
|| ip.app_rate.equals("LOW")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_plp = "VERY LOW";
} else {
ai_plp = "LOW";
}
} else {
if (ip.app_area.equals("Banded")
|| ip.app_method.equals("Foliar Application")
|| ip.app_rate.equals("LOW")) {
ai_plp = "LOW";
} else if (ip.app_area.equals("Spot Treatment")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_plp = "VERY LOW";
} else {
ai_plp = "INTERMEDIATE";
}
}
String ai_psrp;
// #Compute pesticide solution runoff potential for each operation pesticide
if ((ai_sol >= 1 && ai_hl > 35 && ai_koc < 100000)
|| (ai_sol >= 10 && ai_sol < 100 && ai_koc <= 700)) {
if (ip.app_area.equals("Banded")
|| ip.app_method.equals("Foliar Application")
|| ip.app_method.equals("Soil Incorporated")
|| ip.app_rate.equals("LOW")) {
ai_psrp = "INTERMEDIATE";
} else if (ip.app_area.equals("Spot Treatment")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_psrp = "LOW";
} else {
ai_psrp = "HIGH";
}
} else if ((ai_koc >= 100000)
|| (ai_koc >= 1000 && ai_hl <= 1)
|| (ai_sol < 0.5 && ai_hl < 35)) {
if (ip.app_area.equals("Banded")
|| ip.app_area.equals("Spot Treatment")
|| ip.app_method.equals("Foliar Application")
|| ip.app_method.equals("Soil Incorporated")
|| ip.app_rate.equals("LOW")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_psrp = "VERY LOW";
} else {
ai_psrp = "LOW";
}
} else {
if (ip.app_area.equals("Banded")
|| ip.app_method.equals("Foliar Application")
|| ip.app_method.equals("Soil Incorporated")
|| ip.app_rate.equals("LOW")) {
ai_psrp = "LOW";
} else if (ip.app_area.equals("Spot Treatment")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_psrp = "VERY LOW";
} else {
ai_psrp = "INTERMEDIATE";
}
}
// #Compute pesticide adsorbed runoff potential for each operation pesticide
String ai_parp;
if ((ai_hl >= 40 && ai_koc >= 1000)
|| (ai_hl >= 40 && ai_koc >= 500 && ai_sol <= 0.5)) {
if (ip.app_area.equals("Banded")
|| ip.app_method.equals("Foliar Application")
|| ip.app_method.equals("Soil Incorporate")
|| ip.app_rate.equals("LOW")) {
ai_parp = "INTERMEDIATE";
} else if (ip.app_area.equals("Spot Treatment")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_parp = "LOW";
} else {
ai_parp = "HIGH";
}
} else if ((ai_hl <= 1) || (ai_hl <= 2 && ai_koc <= 500)
|| (ai_hl <= 4 && ai_koc <= 900 && ai_sol >= 0.5)
|| (ai_hl <= 40 && ai_koc <= 500 && ai_sol >= 0.5)
|| (ai_hl <= 50 && ai_koc <= 900 && ai_sol >= 2)) {
if (ip.app_area.equals("Banded")
|| ip.app_area.equals("Spot Treatment")
|| ip.app_method.equals("Foliar Application")
|| ip.app_method.equals("Soil Incorporated")
|| ip.app_rate.equals("LOW")
|| ip.app_rate.equals("ULTRA LOW")) {
ai_parp = "VERY LOW";
} else {
ai_parp = "LOW";
}
} else {
if (ip.app_area.equals("Banded")
|| ip.app_method.equals("Foliar Application")
|| ip.app_method.equals("Soil Incorporated")
|| ip.app_rate.equals("LOW")) {
ai_parp = "VERY LOW";
} else {
ai_parp = "INTERMEDIATE";
}
}
Result1 result = new Result1(ip.AoAId, ip.operation_id,
ip.op_pest_id, ip.app_rate, ai_name, ai_ph, ai_hl,
ai_koc, ai_sol, ai_humtox, ai_humtoxtype, ai_fishtox,
ai_fishtoxtype, ai_plp, ai_psrp, ai_parp,
ip.app_area, ip.app_method);
result1.add(result);
}
} catch (SQLException se) {
LOG.info("Did not open database for WQM-4!");
LOG.info(se.getMessage());
} finally {
if (statement != null) {
statement.close();
}
if (conn != null) {
conn.close();
}
}
return EXEC_OK;
}
@Override
//writing the results back to JSON
protected void postProcess() throws Exception {
JSONArray result1Arr = new JSONArray();
for (Result1 rs1 : result1) {
JSONArray tmpArr = new JSONArray();
tmpArr.put(JSONUtils.dataDesc("AoAId", rs1.AoAId, "Area of Analysis Identifier"));
tmpArr.put(JSONUtils.dataDesc("operation_id", rs1.operation_id, "Operation ID"));
tmpArr.put(JSONUtils.dataDesc("op_pest_id", rs1.op_pest_id, "Pesticide Identifier (PC_CODE)"));
tmpArr.put(JSONUtils.dataDesc("app_rate", rs1.app_rate, "Pesticide Application Rating"));
tmpArr.put(JSONUtils.dataDesc("ai_name", rs1.ai_name, "Active Ingredient Name (AI_NAME)"));
tmpArr.put(JSONUtils.dataDesc("ai_ph", rs1.ai_ph, "Active ingredient pH of associate properties (PH)"));
tmpArr.put(JSONUtils.dataDesc("ai_hl", rs1.ai_hl, "Active ingredient field half life (HL)"));
tmpArr.put(JSONUtils.dataDesc("ai_koc", rs1.ai_koc, "Active ingredient soil organic carbon sorption coefficient (KOC)"));
tmpArr.put(JSONUtils.dataDesc("ai_sol", rs1.ai_sol, "Active ingredient solubility in water (SOL)"));
tmpArr.put(JSONUtils.dataDesc("ai_humtox", rs1.ai_humtox, "Active ingredient human toxicity value – long term"));
tmpArr.put(JSONUtils.dataDesc("ai_humtoxtype", rs1.ai_humtoxtype, "Active ingredient human toxicity type"));
tmpArr.put(JSONUtils.dataDesc("ai_fistox", rs1.ai_fishtox, "Active ingredient maximum acceptable toxicant concentration-fish"));
tmpArr.put(JSONUtils.dataDesc("ai_fishtoxtype", rs1.ai_fishtoxtype, "Active ingredient fish toxicity type"));
tmpArr.put(JSONUtils.dataDesc("ai_plp", rs1.ai_plp, "Active ingredient pesticide leaching potential"));
tmpArr.put(JSONUtils.dataDesc("ai_psrp", rs1.ai_psrp, "Active ingredient pesticide soil leaching potential"));
tmpArr.put(JSONUtils.dataDesc("ai_parp", rs1.ai_parp, "Active ingredient pesticide adsorbed runoff potential"));
tmpArr.put(JSONUtils.dataDesc("op_app_area", rs1.app_area, "Pesticide application operation area"));
tmpArr.put(JSONUtils.dataDesc("op_app_method", rs1.app_method, "Pesticide application operation method"));
result1Arr.put(JSONUtils.dataDesc("pesticide summary", tmpArr, "Pest"));
}
putResult("operation", result1Arr);
}
}