V1_0.java [src/java/m/watershed/grid_analysis] Revision: default Date:
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package m.watershed.grid_analysis;
import csip.ModelDataService;
import javax.ws.rs.Path;
import csip.annotations.*;
import java.io.*;
import csip.annotations.Resource;
import static csip.annotations.ResourceType.*;
import csip.api.server.Executable;
/**
* Grid_analysis
*
* @author JK (using OD's template)
*/
@Name("grid_analysis")
@Description("Example of grid analysis")
@Path("m/grid_analysis/1.0")
//@Resource(file = "mpirun", type = REFERENCE, id = "mpirun")
@Resource(file = "/bin/lin-amd64/gridnet", type = EXECUTABLE, id = "gridnet")
public class V1_0 extends ModelDataService {
// 2) watershed
@Override
protected void doProcess() throws Exception {
String file1 = parameter().getString("flow_8_dir");
File file_obj = attachments().getFile(file1);
String flow_8dir_path = file_obj.getPath();
String wd = workspace().getDir().toString();
//Executable e = resources().getExe("mpirun");
//File e2 = resources().getFile("gridnet");
Executable e = resources().getExe("gridnet");
//e.addArguments("-np", "2", "-host", "localhost", e2.getAbsolutePath(), "-p", flow_8dir_path, "-plen", wd + "/plen.tif", "-tlen", wd + "/tlen.tif", "-gord", wd + "/gord.tif");
e.addArguments("-p", flow_8dir_path, "-plen", wd + "/plen.tif", "-tlen", wd + "/tlen.tif", "-gord", wd + "/gord.tif");
e.exec();
}
// 3) provide the result.
@Override
protected void postProcess() throws Exception {
File ws = workspace().getDir();
results().put(new File(ws, "plen.tif"), "Longest flow path");
results().put(new File(ws, "tlen.tif"), "Total lengths of flow path");
results().put(new File(ws, "gord.tif"), "Grid network order");
}
}